Molecular and cell biology

62 problems

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Mitochondrial DNA bottleneck

A mother’s mix of mitochondrial DNA variants can change sharply between generations. What physical sampling process drives that change?

Biomolecular condensate function

Cells concentrate molecules in membraneless compartments. What makes their changing composition and material behavior useful for particular tasks?

Mitotic spindle self-organization

Spindles organize filaments to separate chromosomes. How do chromosome-attached bundles integrate with the spindle’s collective organization?

Mammalian replication origins

Mammalian DNA replication can begin at many licensed sites. What determines which sites actually start copying in a given cell?

Granulophagy

Most stress granules disperse when stress ends. How does autophagy recognize and remove the granules that persist?

Mitochondrial gene retention

Mitochondria keep some genes while many others reside in the nucleus. Why do different lineages retain different sets?

Meiotic homologue recognition

During egg formation in fruit flies, matching chromosomes must find one another. How do repeated DNA sequences help them recognize a match?

Non-photochemical quenching

Plants safely release excess absorbed light as heat. How does their light-harvesting machinery switch this protection on and off?

Polyploid establishment

A plant with extra chromosome sets may have few compatible mates. Which conditions let a new polyploid population persist?

Gravity sensing in plants

Roots and shoots can tell which way gravity points. How do settling structures inside cells become a directional growth signal?

Speciation with gene flow

New species can diverge while exchanging genes. How do reproductive barriers combine to sustain separation?

Arbuscule maintenance

Does nutrient delivery by a fungal branch inside a root influence how long the plant maintains it?

Coral bleaching

Heat stress can disrupt the partnership between corals and their photosynthetic symbionts. Which cellular pathways cause symbiont loss in different conditions?

Nitrogenase catalytic mechanism

Nitrogenase converts nitrogen gas into ammonia that life can use. Which atomic reaction pathway accounts for its observed chemistry?

Spore hydration

Dormant bacterial spores take up water as they restart. Does GerAB provide a water route in Bacillus subtilis?

Oxytricha genome rearrangement

Oxytricha rebuilds its working genome from scrambled DNA segments. How do RNA instructions become correctly ordered DNA joins?

De novo gene birth

New protein-coding genes can arise from DNA that did not previously encode a protein. Which ones become useful and persist through evolution?

Malaria relapse

Plasmodium vivax can remain dormant in the liver before causing malaria again. What makes the parasite restart replication?

Endometriosis

Endometriosis involves lasting lesions outside the uterus. Which uterine-cell and immune changes help initiate them, rather than result from established disease?

Root hydrotropism

A root can curve toward a wetter patch of soil. What first tells its growing cells that one side has more available water than the other?

S-RNase specificity

A Petunia flower can stop its own pollen while accepting pollen with a different mating type. How does a small team of pollen proteins distinguish so many versions of the same toxic enzyme?